Oliver's mTOR Atlas Evidence Platform
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Structural basis for the docking of mTORC1 on the lysosomal surface

Rogala KB, Gu X, Kedir JF, Abu-Remaileh M, Bianchi LF, Bottino AMS, Dueholm R, Niehaus A, Overwijn D, Fils AP, Zhou SX, …, Sabatini DM · 2019 · Science · Atlas ID ROG2019

What this study shows

3.2-angstrom cryo-EM structure of Raptor bound to Rag-Ragulator, showing how Raptor reads out the nutrient-dependent nucleotide state of the Rag GTPases: one part of Raptor senses RagA's nucleotide state, a separate 'claw' senses RagC's, and both have to be in the correct nutrient-signalling combination before Raptor is allowed to dock. Mutating the contact points blocks mTORC1 from reaching the lysosome and inhibits its signalling, which is the functional evidence behind the structural claim. Combined with a separate structure of mTORC1 bound to its activator Rheb, the paper builds a model of the complete, active mTORC1 sitting on the lysosome. Boundary: cryo-EM of a complex reconstituted from purified human proteins, not a live-cell measurement.

Abstract

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The mTORC1 (mechanistic target of rapamycin complex 1) protein kinase regulates growth in response to nutrients and growth factors. Nutrients promote its translocation to the lysosomal surface, where its Raptor subunit interacts with the Rag guanosine triphosphatase (GTPase)-Ragulator complex. Nutrients switch the heterodimeric Rag GTPases among four different nucleotide-binding states, only one of which (RagA/B GTP-RagC/D GDP) permits mTORC1 association.

Read the full abstract on PubMed →

At a glance

Evidence type M Molecular — cells, biochemistry, structure Marked M because it is molecular or in-vitro work (model: Cryo-EM structure (human proteins, cell-free reconstitution) + cell-based mutagenesis) rather than a whole-organism health-outcome study. That is often exactly where causal biology gets established -- the code says which system the finding was shown in, and nothing about how good the work is.
Study type5 - Mechanistic / In Vitro
Model systemCryo-EM structure (human proteins, cell-free reconstitution) + cell-based mutagenesis
JournalScience
Year2019
Peer reviewedYes
Record last updated2026-10-01
SourceDOI 10.1126/science.aay0166 · PMID 31601708 · Free full text (PMC7176403)

Extracted findings

These fields were extracted from the paper with AI assistance and have not been checked against the source. Read them as a pointer into the paper, not as curated claims; where they disagree with the curated summary above, the curated summary stands.

InterventionStructural (cryo-EM, reconstituted complex) + mutagenesis
TargetmTORC1 / Raptor / Rag-Ragulator
ModelHuman proteins, cell-free reconstitution
Effect3.2 A structure showing how Raptor reads the nucleotide state of RagA and RagC to dock mTORC1 on the lysosome; docking-disrupting mutations block mTORC1 lysosomal localization and signalling

In the Atlas

Related topics

RaptorRag GTPasesmTORC1RhebRagulator

More studies on this topic

Learn the biology

Want to understand the biology behind this study? → The Lysosome as a Signalling Platform

Cite this paper

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Rogala, K. B., Gu, X., Kedir, J. F., Abu-Remaileh, M., Bianchi, L. F., Bottino, A. M. S., Dueholm, R., Niehaus, A., Overwijn, D., Fils, A. P., Zhou, S. X., Leary, D., Laqtom, N. N., Brignole, E. J., & Sabatini, D. M. (2019). Structural basis for the docking of mTORC1 on the lysosomal surface. Science. https://doi.org/10.1126/science.aay0166

@article{ROG2019,
  author       = {Rogala, K. B. and Gu, X. and Kedir, J. F. and Abu-Remaileh, M. and Bianchi, L. F. and Bottino, A. M. S. and Dueholm, R. and Niehaus, A. and Overwijn, D. and Fils, A. P. and Zhou, S. X. and Leary, D. and Laqtom, N. N. and Brignole, E. J. and Sabatini, D. M.},
  title        = {{Structural basis for the docking of mTORC1 on the lysosomal surface}},
  journal      = {Science},
  year         = {2019},
  doi          = {10.1126/science.aay0166},
  note         = {PMID: 31601708},
}

Cite this Atlas record

The record is the Atlas's own work — the evidence label, the extracted findings and the links. It is cited as part of the dataset, not as the paper.

Barton, O. (2026). Oliver's mTOR Atlas (record ROG2019) [Data set]. https://mtor-atlas.org/study/ROG2019/ · Dataset DOI 10.5281/zenodo.22059963

@misc{atlas_ROG2019,
  author       = {Barton, Oliver},
  title        = {{Oliver's mTOR Atlas}, record ROG2019},
  howpublished = {Data set},
  year         = {2026},
  url          = {https://mtor-atlas.org/study/ROG2019/},
  doi          = {10.5281/zenodo.22059963}
}
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