Oliver's mTOR Atlas Evidence Platform
Reading level
Mode

PKM2

Gene/Protein · 1 studies in the Atlas · also known as Pyruvate kinase M2, PKM

Pyruvate kinase M2, best known as a glycolytic enzyme. A single 2026 study (SANG2026, human cells, photoaffinity methionine probe and chemoproteomics) reports that PKM2 also binds free methionine through a pocket separate from its catalytic site and relays methionine availability to mTORC1 through the GATOR2 complex, independently of its enzyme activity. Not yet replicated, and its importance in whole animals is untested.

A sugar-burning enzyme that may double as a methionine detector. A sugar-burning enzyme that, according to one recent study in human cells, also works as a methionine detector for mTORC1. Nobody has repeated that result yet, and it has not been tested in animals.

SANG2026 (photoaffinity chemoproteomics, human cells): methionine binds a pocket separate from the catalytic site, sensing independent of enzyme activity, signal relayed via GATOR2. Single study, not replicated; whole-organism relevance untested.

TL;DR. PKM2 appears in 1 curated study in Oliver's mTOR Atlas: 1 at the molecular level (cells, biochemistry, structure). No study in people is recorded for it in the Atlas yet. It has 2 interactions in the curated pathway model.

In the pathway model

2 interactions in the curated mTOR pathway model (1 acting from PKM2, 1 acting on it). Each row is a claim with the evidence behind it; the evidence code is the kind of study, not its quality.

InteractionMechanismEvidenceStudies
PKM2 inhibits GATOR2 mechanism: binding · this link in full · on the map table Without methionine, PKM2 holds GATOR2 back, so mTORC1 stays off.When methionine is scarce, PKM2 interacts with the GATOR2 complex and keeps it from relaying the 'nutrients present' signal, so mTORC1 stays off. The authors propose that stabilising the PKM2-GATOR2 interaction would mimic methionine starvation. Same double-negative logic as Sestrin2 for leucine and CASTOR1 for arginine. Holds under: One study in cultured human cells (SANG2026). Whether PKM2 binds GATOR2 directly or through another protein, and on which subunit, is not stated in the abstract, so the step is marked unresolved. Cell and chemoproteomic data do not show that this sensor matters for mTORC1 in a whole organism. Not yet replicated. The methionine route via PKM2 converges on GATOR2, the same complex read by Sestrin2 (leucine) and CASTOR1 (arginine); the SAM route via SAMTOR acts one step further on, at GATOR1-KICSTOR. plausible in people, not shown directly · emerging, few independent studies M SANG2026
Methionine binds PKM2 mechanism: binding · this link in full · on the map table Methionine sticks to PKM2. This does not switch the enzyme off; it just stops PKM2 from holding the brake on GATOR2. A second methionine detector next to SAMTOR.Free methionine binds PKM2 in a recognition pocket separate from its catalytic site. Binding does not inhibit PKM2 as an enzyme: the sensing works independently of its glycolytic activity. What changes is PKM2's interaction with GATOR2: when methionine is present, PKM2 stops restraining GATOR2 (the restraining step is the separate PKM2-GATOR2 edge), so methionine switches that brake off. The binding was captured in living human cells with a photoaffinity methionine analogue and confirmed biochemically. This reads methionine itself, unlike SAMTOR, which reads the metabolite SAM. Holds under: One study in cultured human cells (SANG2026): photoaffinity chemoproteomics plus biochemical validation. No affinity measurement in tissue, no animal or human test, and not yet replicated by another group. The direction (methionine binding relieves PKM2's restraint on GATOR2) is taken from the authors' abstract; the full text was not accessible when this link was written. Parallel to, not a replacement for, SAM sensing by SAMTOR (SAM-SAMTOR): the two sensors read different molecules and act on different complexes (PKM2 on GATOR2, SAMTOR on GATOR1-KICSTOR). How much each contributes when methionine is restricted in a whole animal is untested. plausible in people, not shown directly · emerging, few independent studies M SANG2026

Evidence at a glance

EvidenceWhat it meansStudies
M Molecular — cells, biochemistry, structure1

No direct human evidence in the Atlas for this entity yet — everything below rests on animal or molecular work.

Studies

YearEvidenceStudy
2026 M "Trojan" Methionine Probe Reveals PKM2 as a Methionine-Sensing Protein in the mTORC1 Pathway SANG2026 Identifies PKM2 as a direct methionine sensor for mTORC1. A photoaffinity methionine analogue plus chemoproteomics showed that PKM2 binds free methionine through a distinct recognition pocket — independently of its glycolytic enzyme activity — and transduces methionine availability to mTORC1 via the GATOR2 complex. Complements SAMTOR (GU2017), which reads the methionine metabolite SAM rather than methionine itself, and suggests a route to a pharmacological "methionine pseudostarvation" state.

Related entities

GATOR2 1mTORC1 1Methionine 1

Cite this page

ShowHide
Barton, O. (2026). PKM2 [Entity page]. In Oliver's mTOR Atlas [Data set]. https://mtor-atlas.org/gene/pkm2/ · Dataset DOI 10.5281/zenodo.22059963

@misc{atlas_gene_pkm2,
  author       = {Barton, Oliver},
  title        = {{Oliver's mTOR Atlas}: PKM2},
  howpublished = {Entity page in a data set},
  year         = {2026},
  url          = {https://mtor-atlas.org/gene/pkm2/},
  doi          = {10.5281/zenodo.22059963}
}
Was this page useful?